PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008241823.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 326aa    MW: 36004.7 Da    PI: 6.5212
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008241823.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.61.5e-1051100154
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     r++ +  rE+ RRdr+N+ f+eL   l ++     +K++Ka+iL+ +++ +k+L
  XP_008241823.1  51 RKVQKADREKLRRDRLNEHFHELGNTLDPD----RPKNDKATILTDTIQMLKDL 100
                     5677889********************997....79****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.45950100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.14E-751104No hitNo description
Gene3DG3DSA:4.10.280.109.3E-1251123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.22E-1251116IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.0E-851100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.0E-756106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
MDQWNGDDFS AASAPSSAQP LLLPSSNRSH NSNSESRQRP DVETKDPIAA RKVQKADREK  60
LRRDRLNEHF HELGNTLDPD RPKNDKATIL TDTIQMLKDL TADVGKLKAE CAALTDESRE  120
LTQEKNELRE EKASLKSDIE NLNVQYQQRL RVMFPWAAMD PSVVMAPQYS YPMPVAVPPC  180
SIPMHPSLQP FPYFQTQTPA AIPNPCSTFA PYQAPANPHV EQPAPQYASV SHLSSKQDSR  240
SKSSDMQRGS NAERCDDSND VATDLELKMP GSSTQQDSSS GGRKAKQSQR KDRVVTDGSS  300
SSRYSSSQGL QDNSSNSVGD VPKSNK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008241823.10.0PREDICTED: transcription factor bHLH121
SwissprotQ9LT232e-87BH121_ARATH; Transcription factor bHLH121
TrEMBLM5WH390.0M5WH39_PRUPE; Uncharacterized protein
STRINGVIT_04s0023g03430.t011e-147(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22823376
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.19e-82bHLH family protein